STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2621Hypothetical protein. (160 aa)    
Predicted Functional Partners:
abfB-2
Arabinofuranosidase.
  
     0.648
ACPL_3002
Hypothetical protein.
  
     0.646
abfB-3
Arabinofuranosidase.
  
     0.639
ACPL_7193
Streptogrisin C; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
     0.567
glcI-2
Glucan endo-1,3-beta-D-glucosidase.
  
     0.559
ACPL_8125
Uncharacterized protein conserved in bacteria.
  
     0.556
ACPL_6762
Hypothetical protein.
  
     0.541
ACPL_2620
Uncharacterized membrane protein.
       0.538
ACPL_3005
Endoglucanase.
  
     0.505
ACPL_3212
Hypothetical protein; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.
  
     0.490
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.