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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2628Dyp-type peroxidase family protein; Predicted iron-dependent peroxidase. (473 aa)    
Predicted Functional Partners:
efeO
ycdO-like uncharacterized protein; Predicted periplasmic lipoprotein involved in iron transport.
  
  
 0.830
ACPL_8258
Hypothetical protein.
  
     0.706
ACPL_4120
peptidyl-Lys metalloendopeptidase.
  
     0.699
efeU
Ferrous iron permease efeU; High-affinity Fe2+/Pb2+ permease.
  
  
 0.668
ACPL_2871
Putative copper export protein.
  
  
 0.642
ACPL_5617
Uncharacterized protein, homolog of Cu resistance protein CopC.
  
  
 0.642
ACPL_1190
Putative copper export protein.
  
  
 0.598
ACPL_6128
Putative WD repeat-containing protein; FOG: WD40 repeat.
  
     0.562
ACPL_5648
Putative WD repeat-containing protein; FOG: WD40 repeat.
  
     0.538
ACPL_2629
Hypothetical protein.
       0.514
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.