STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfeAManganese ABC transporter substrate-binding lipoprotein; ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family. (317 aa)    
Predicted Functional Partners:
yfeC
Chelated iron transport system membrane protein yfeD; ABC-type Mn2+/Zn2+ transport systems, permease components.
  
 0.995
yfeD
Chelated iron transport system membrane protein yfeD; ABC-type Mn2+/Zn2+ transport systems, permease components.
  
 0.990
yfeB
Manganese/zinc/iron transport system ATP- binding protein; ABC-type sugar transport systems, ATPase components.
 
  
 0.989
ACPL_1435
Chelated iron transport system membrane protein yfeD; ABC-type Mn2+/Zn2+ transport systems, permease components.
 
  
 0.938
mntB
Zinc transport system ATP-binding protein; ABC-type sugar transport systems, ATPase components.
 
  
 0.909
ACPL_268
Hypothetical protein; Predicted transcriptional regulators.
     
 0.789
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.588
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.588
ideR
Iron-dependent repressor ideR; Mn-dependent transcriptional regulator.
  
  
 0.451
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
 
  
 0.445
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.