Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACPL_2639 | ACPL_2641 | ACPL_2639 | ACPL_2641 | Hypothetical protein. | Phosphoglycerate mutase 1. | 0.576 |
ACPL_2639 | cd14 | ACPL_2639 | ACPL_2642 | Hypothetical protein. | Monocyte differentiation antigen CD14. | 0.404 |
ACPL_2639 | prt1 | ACPL_2639 | ACPL_2640 | Hypothetical protein. | Peptidase M4 thermolysin; Extracellular zinc metalloprotease. | 0.781 |
ACPL_2641 | ACPL_2639 | ACPL_2641 | ACPL_2639 | Phosphoglycerate mutase 1. | Hypothetical protein. | 0.576 |
ACPL_2641 | ACPL_2643 | ACPL_2641 | ACPL_2643 | Phosphoglycerate mutase 1. | Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase). | 0.407 |
ACPL_2641 | ACPL_272 | ACPL_2641 | ACPL_272 | Phosphoglycerate mutase 1. | Imidazolonepropionase and related amidohydrolases. | 0.607 |
ACPL_2641 | ACPL_6436 | ACPL_2641 | ACPL_6436 | Phosphoglycerate mutase 1. | Predicted aminopeptidases. | 0.613 |
ACPL_2641 | cd14 | ACPL_2641 | ACPL_2642 | Phosphoglycerate mutase 1. | Monocyte differentiation antigen CD14. | 0.525 |
ACPL_2641 | cobE | ACPL_2641 | ACPL_5301 | Phosphoglycerate mutase 1. | Protein cobE; Cobalamin biosynthesis protein CbiG. | 0.431 |
ACPL_2641 | cobI | ACPL_2641 | ACPL_6901 | Phosphoglycerate mutase 1. | Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase; Precorrin-3B methylase. | 0.498 |
ACPL_2641 | prt1 | ACPL_2641 | ACPL_2640 | Phosphoglycerate mutase 1. | Peptidase M4 thermolysin; Extracellular zinc metalloprotease. | 0.576 |
ACPL_2643 | ACPL_2641 | ACPL_2643 | ACPL_2641 | Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase). | Phosphoglycerate mutase 1. | 0.407 |
ACPL_2643 | cd14 | ACPL_2643 | ACPL_2642 | Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase). | Monocyte differentiation antigen CD14. | 0.937 |
ACPL_272 | ACPL_2641 | ACPL_272 | ACPL_2641 | Imidazolonepropionase and related amidohydrolases. | Phosphoglycerate mutase 1. | 0.607 |
ACPL_272 | ACPL_6436 | ACPL_272 | ACPL_6436 | Imidazolonepropionase and related amidohydrolases. | Predicted aminopeptidases. | 0.538 |
ACPL_6436 | ACPL_2641 | ACPL_6436 | ACPL_2641 | Predicted aminopeptidases. | Phosphoglycerate mutase 1. | 0.613 |
ACPL_6436 | ACPL_272 | ACPL_6436 | ACPL_272 | Predicted aminopeptidases. | Imidazolonepropionase and related amidohydrolases. | 0.538 |
cd14 | ACPL_2639 | ACPL_2642 | ACPL_2639 | Monocyte differentiation antigen CD14. | Hypothetical protein. | 0.404 |
cd14 | ACPL_2641 | ACPL_2642 | ACPL_2641 | Monocyte differentiation antigen CD14. | Phosphoglycerate mutase 1. | 0.525 |
cd14 | ACPL_2643 | ACPL_2642 | ACPL_2643 | Monocyte differentiation antigen CD14. | Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase). | 0.937 |
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