Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2645Hypothetical protein. (105 aa)    
Predicted Functional Partners:
ACPL_2644
Hypothetical protein.
 
     0.952
ACPL_2643
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase).
 
     0.808
ACPL_2393
Hypothetical protein.
 
     0.777
ACPL_2395
Hypothetical protein.
 
     0.764
cd14
Monocyte differentiation antigen CD14.
 
     0.753
ACPL_2396
Hypothetical protein.
 
     0.733
ACPL_1448
ADAM 12 protein.
  
     0.701
ACPL_2394
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases.
 
     0.675
ACPL_2646
Calcium-gated potassium channel mthK; Kef-type K+ transport systems, predicted NAD-binding component.
       0.664
ACPL_4448
Truncated hemoglobins.
  
     0.584
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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