STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2652Epoxide hydrolase 2; ABC-type sugar transport system, periplasmic component. (584 aa)    
Predicted Functional Partners:
ACPL_2653
Putative 55.3 kDa protein in thcA 5'region; Glycosyltransferases involved in cell wall biogenesis.
   
 0.995
rfaE
Cytidyltransferase-like protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
  
 0.981
ACPL_2651
Glycosyl transferase, group 1; Glycosyltransferase.
 
  
 0.955
ACPL_2650
Glycosyltransferase.
 
  
 0.951
ACPL_2648
3-oxoacyl-[acyl-carrier-protein] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.947
ACPL_2654
Carbamoyltransferase; Predicted carbamoyl transferase, NodU family.
 
  
 0.944
ACPL_2647
ADP-heptose-LPS heptosyltransferase 2; ADP-heptose:LPS heptosyltransferase.
 
   
0.872
ACPL_6582
Glycosyl transferase, group 1; Glycosyltransferase.
 
  
 0.778
ACPL_2656
Glycosyl transferase, group 2 family protein; Predicted glycosyltransferases.
 
   
 0.749
hisH
Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
  
  
 0.741
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.