STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2657yfmI-like uncharacterized MFS-type transporter; Permeases of the major facilitator superfamily. (406 aa)    
Predicted Functional Partners:
ACPL_539
Permeases of the major facilitator superfamily.
  
     0.764
ACPL_2182
Uncharacterized protein; Permeases of the major facilitator superfamily.
  
     0.749
bacE
Putative bacilysin exporter bacE; Permeases of the major facilitator superfamily.
  
     0.745
ACPL_1015
yfiS-like uncharacterized MFS-type transporter; Permeases of the major facilitator superfamily.
  
     0.739
ACPL_3040
yfiS-like uncharacterized MFS-type transporter; Permeases of the major facilitator superfamily.
  
     0.677
ACPL_2656
Glycosyl transferase, group 2 family protein; Predicted glycosyltransferases.
       0.574
sigH
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); Belongs to the sigma-70 factor family.
       0.488
ACPL_1315
yuxJ-like uncharacterized MFS-type transporter; Permeases of the major facilitator superfamily.
  
     0.449
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.