STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2688Polycystic kidney disease protein 1-like 3. (550 aa)    
Predicted Functional Partners:
ACPL_7746
Glycogen synthase; Glycosyltransferase.
  
     0.744
ACPL_2130
Glycogen synthase; Glycosyltransferase.
  
     0.724
ACPL_2687
Hypothetical protein.
       0.723
ACPL_2691
Transglutaminase domain-containing protein; Transglutaminase-like enzymes, putative cysteine proteases.
 
     0.672
ACPL_3946
Hypothetical protein.
  
     0.613
ACPL_2232
Parallel beta-helix repeat protein.
  
     0.605
ACPL_5159
Mini-circle putative transposase for IS117.
  
     0.537
ACPL_1049
Protein piccolo; DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
     0.516
ACPL_4396
Hypothetical protein; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
  
     0.494
moxR
MoxR-like ATPases.
       0.488
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.