STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_269ycgR-like uncharacterized protein; Predicted permeases. (333 aa)    
Predicted Functional Partners:
ACPL_270
ycgQ-like uncharacterized protein; Predicted membrane protein.
 
  
 0.957
ACPL_2724
Predicted membrane protein.
 
  
 0.864
ACPL_271
Hypothetical protein.
       0.697
ACPL_2633
Uncharacterized protein; Predicted nucleoside-diphosphate-sugar epimerases.
   
    0.487
ACPL_3955
Putative NADH-flavin reductase.
   
    0.487
ACPL_4570
Flavin reductase; Nucleoside-diphosphate-sugar epimerases.
   
    0.487
ACPL_348
Teneurin-3; Rhs family protein.
  
     0.461
ACPL_6716
Laccase-12; Putative multicopper oxidases.
  
  
 0.457
ACPL_7376
Putative multicopper oxidase.
  
  
 0.457
ACPL_3372
Teneurin-1; Rhs family protein.
  
     0.455
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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