STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_270ycgQ-like uncharacterized protein; Predicted membrane protein. (230 aa)    
Predicted Functional Partners:
ACPL_269
ycgR-like uncharacterized protein; Predicted permeases.
 
  
 0.957
ACPL_2725
ycgR-like uncharacterized protein; Predicted permeases.
 
  
 0.864
ACPL_271
Hypothetical protein.
       0.773
ACPL_348
Teneurin-3; Rhs family protein.
  
     0.508
ACPL_3372
Teneurin-1; Rhs family protein.
  
     0.506
ACPL_1311
Hypothetical protein.
  
     0.448
ACPL_8082
Outer membrane protein/protective antigen OMA87.
  
     0.417
ACPL_2264
Fibronectin type 3 domain-containing protein.
  
     0.415
ACPL_1540
Bifunctional DNA primase/polymerase.
  
     0.413
yfeA
Manganese ABC transporter substrate-binding lipoprotein; ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
       0.410
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.