rtcB protein (Actinoplanes sp. SE50110) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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[Homology]

Score

rtcB

Uncharacterized protein. (386 aa)

Predicted Functional Partners:

ACPL_2723

0.686

ddx5

0.660

deaD

0.660

ACPL_6666

0.660

ACPL_717

0.660

ACPL_2721

0.581

ACPL_1886

0.496

erf1

0.496

ACPL_4414

0.456

ACPL_6585

0.442

Your Current Organism:

Actinoplanes sp. SE50110

NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACPL_1886	rtcB	ACPL_1886	ACPL_2722	Hypothetical protein.	Uncharacterized protein.	0.496
ACPL_2721	ACPL_2723	ACPL_2721	ACPL_2723	Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.	Hypothetical protein.	0.520
ACPL_2721	rtcB	ACPL_2721	ACPL_2722	Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.	Uncharacterized protein.	0.581
ACPL_2723	ACPL_2721	ACPL_2723	ACPL_2721	Hypothetical protein.	Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.	0.520
ACPL_2723	rtcB	ACPL_2723	ACPL_2722	Hypothetical protein.	Uncharacterized protein.	0.686
ACPL_4414	rtcB	ACPL_4414	ACPL_2722	Uncharacterized protein; Predicted nucleotidyltransferase.	Uncharacterized protein.	0.456
ACPL_6585	rtcB	ACPL_6585	ACPL_2722	Hypothetical protein.	Uncharacterized protein.	0.442
ACPL_6666	rtcB	ACPL_6666	ACPL_2722	Pre-mRNA-processing ATP-dependent RNA helicase PRP5; Superfamily II DNA and RNA helicases.	Uncharacterized protein.	0.660
ACPL_717	rtcB	ACPL_717	ACPL_2722	Pre-mRNA-processing ATP-dependent RNA helicase PRP5; Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.660
ddx5	rtcB	ACPL_418	ACPL_2722	DEAD/DEAH box helicase domain-containing protein; Superfamily II DNA and RNA helicases.	Uncharacterized protein.	0.660
deaD	rtcB	ACPL_5762	ACPL_2722	Cold-shock DEAD box protein A; Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.660
erf1	rtcB	ACPL_4739	ACPL_2722	Peptide chain release factor 1 (eRF1).	Uncharacterized protein.	0.496
rtcB	ACPL_1886	ACPL_2722	ACPL_1886	Uncharacterized protein.	Hypothetical protein.	0.496
rtcB	ACPL_2721	ACPL_2722	ACPL_2721	Uncharacterized protein.	Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.	0.581
rtcB	ACPL_2723	ACPL_2722	ACPL_2723	Uncharacterized protein.	Hypothetical protein.	0.686
rtcB	ACPL_4414	ACPL_2722	ACPL_4414	Uncharacterized protein.	Uncharacterized protein; Predicted nucleotidyltransferase.	0.456
rtcB	ACPL_6585	ACPL_2722	ACPL_6585	Uncharacterized protein.	Hypothetical protein.	0.442
rtcB	ACPL_6666	ACPL_2722	ACPL_6666	Uncharacterized protein.	Pre-mRNA-processing ATP-dependent RNA helicase PRP5; Superfamily II DNA and RNA helicases.	0.660
rtcB	ACPL_717	ACPL_2722	ACPL_717	Uncharacterized protein.	Pre-mRNA-processing ATP-dependent RNA helicase PRP5; Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.	0.660
rtcB	ddx5	ACPL_2722	ACPL_418	Uncharacterized protein.	DEAD/DEAH box helicase domain-containing protein; Superfamily II DNA and RNA helicases.	0.660