STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2724Predicted membrane protein. (237 aa)    
Predicted Functional Partners:
ACPL_2725
ycgR-like uncharacterized protein; Predicted permeases.
 
  
 0.968
ACPL_269
ycgR-like uncharacterized protein; Predicted permeases.
 
  
 0.864
cheR
Methylase of chemotaxis methyl-accepting proteins.
       0.558
ACPL_3372
Teneurin-1; Rhs family protein.
  
     0.497
ACPL_348
Teneurin-3; Rhs family protein.
  
     0.496
ACPL_1311
Hypothetical protein.
  
     0.467
ACPL_1540
Bifunctional DNA primase/polymerase.
  
     0.443
ACPL_8082
Outer membrane protein/protective antigen OMA87.
  
     0.419
cheB-2
Two-component system, chemotaxis family, response regulator CheB; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
       0.418
ACPL_1454
Hypothetical protein.
 
     0.414
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.