STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2738Transcriptional regulators. (229 aa)    
Predicted Functional Partners:
nadR
Transcriptional regulator nadR; FAD synthase.
   
  
 0.706
ACPL_4174
Transcriptional regulators.
 
  
 0.682
lamA
Biotin carboxylase.
       0.665
ACPL_4189
Fatty acid metabolism regulator protein; Transcriptional regulators.
 
  
 0.646
ACPL_4171
Fatty acid metabolism regulator protein; Transcriptional regulators.
 
  
 0.640
dgoR
Fatty acid metabolism regulator protein; Transcriptional regulators.
 
  
 0.631
ilvH
Acetolactate synthase, small (regulatory) subunit.
   
    0.618
ACPL_7555
Uxu operon regulator; Transcriptional regulators.
 
  
 0.551
ACPL_2739
alpha-L-arabinofuranosidase B catalytic.
       0.500
kdgR
Pectin degradation repressor protein kdgR; Transcriptional regulator.
  
  
 0.499
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.