STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2756ywbI-like uncharacterized HTH-type transcriptional regulator; Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (315 aa)    
Predicted Functional Partners:
ACPL_2757
Catechol 1,2-dioxygenase; Protocatechuate 3,4-dioxygenase beta subunit.
     
 0.759
ACPL_4227
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.734
ACPL_2754
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
     
 0.563
ACPL_2753
Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
     
 0.562
pcaF
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.557
gltB
Glutamate synthase domain 2.
 
   
 0.543
ssuD-3
Alkanesulfonate monooxygenase; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
       0.515
ACPL_2758
Putative ABC transporter ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
       0.433
yclJ
yclJ-like uncharacterized transcriptional regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
  
 0.420
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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