STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2757Catechol 1,2-dioxygenase; Protocatechuate 3,4-dioxygenase beta subunit. (87 aa)    
Predicted Functional Partners:
tcbF
Lactaldehyde reductase; Alcohol dehydrogenase, class IV.
 
  
 0.830
ACPL_2756
ywbI-like uncharacterized HTH-type transcriptional regulator; Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
     
 0.759
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
  
 
 0.625
ACPL_2753
Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
  
  
 0.611
ACPL_2754
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
  
  
 0.606
pcaG
Protocatechuate 3,4-dioxygenase beta subunit.
 
  
 0.590
pcaF
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.582
pcaB
3-carboxy-cis,cis-muconate cycloisomerase; Adenylosuccinate lyase.
 
  
 0.569
pcaH
Protocatechuate 3,4-dioxygenase beta subunit.
 
  
 0.545
kmo
Monooxygenase, FAD-binding protein; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
    
 0.527
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.