Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2765Hypothetical protein. (258 aa)    
Predicted Functional Partners:
ACPL_1239
Hypothetical protein.
   
    0.521
ACPL_1364
Collagen alpha-4(VI) chain; Superfamily II DNA and RNA helicases.
   
    0.521
ACPL_2060
Calcineurin-binding protein cabin-1; Serine/threonine protein kinase.
   
    0.521
ACPL_7242
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components.
   
    0.521
ACPL_776
Hypothetical protein.
   
    0.521
ACPL_977
Myosin-XV.
   
    0.521
ACPL_4387
Hypothetical protein.
  
     0.514
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.484
nrps1B
Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.484
ACPL_2665
Uncharacterized hemerythrin-like protein.
  
     0.468
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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