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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xdhBXanthine dehydrogenase YagS FAD-binding subunit; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs. (324 aa)    
Predicted Functional Partners:
ACPL_2775
Xanthine dehydrogenase YagT iron-sulfur-binding subunit; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 
 0.999
ACPL_2777
Xanthine dehydrogenase YagR molybdenum-binding subunit; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
 
 0.999
ACPL_4974
Hypothetical protein; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 
 
 0.935
ACPL_1443
yqeB-like uncharacterized protein; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
 
 0.916
kmo
Monooxygenase, FAD-binding protein; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
     
  0.900
ACPL_5014
Purine nucleosidase; Inosine-uridine nucleoside N-ribohydrolase.
     
  0.900
hpt
Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
  0.900
deoD
Purine-nucleoside phosphorylase.
     
  0.900
ACPL_2778
Hypothetical protein.
       0.658
ACPL_2774
Hypothetical protein.
       0.554
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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