STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_278D-alanyl-D-alanine carboxypeptidase. (307 aa)    
Predicted Functional Partners:
vanY
Peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; D-alanyl-D-alanine carboxypeptidase.
  
  
  0.950
dacC
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.906
dac
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.906
ndhD
NAD(P)H-quinone oxidoreductase chain 4; Similar to chloroplast protein; Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.663
ACPL_5542
O-antigen polymerase.
  
     0.650
ACPL_6941
Uncharacterized protein contain chitin-binding domain type 3.
  
     0.625
ACPL_6556
Large exoproteins involved in heme utilization or adhesion.
  
     0.622
ACPL_6509
Hypothetical protein.
  
     0.617
ACPL_5655
Hypothetical protein.
  
     0.570
ACPL_2409
YkuD-like spore protein; Uncharacterized protein conserved in bacteria.
  
  
  0.565
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.