Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xylR-2Putative xylose repressor; Transcriptional regulator/sugar kinase. (391 aa)    
Predicted Functional Partners:
araH
Putative multiple sugar transport system permease protein; ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.578
chvE
Multiple sugar-binding periplasmic receptor chvE; ABC-type xylose transport system, periplasmic component.
 
     0.569
araG
L-arabinose transport ATP-binding protein araG; ABC-type sugar transport system, ATPase component.
     
 0.521
gltB
Glutamate synthase domain 2.
     
 0.444
ppgK
Polyphosphate glucokinase; Transcriptional regulator/sugar kinase.
  
  
 0.425
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: low (24%) [HD]