STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2804Putative amidohydrolase ytcJ; Predicted metal-dependent hydrolase with the TIM-barrel fold. (511 aa)    
Predicted Functional Partners:
ACPL_2805
L-erythro-3,5-diaminohexanoate dehydrogenase; NADPH:quinone reductase and related Zn-dependent oxidoreductases.
       0.799
mutL
Methylaspartate mutase.
       0.788
kamE
Beta-lysine 5,6-aminomutase; Predicted cobalamin binding protein.
       0.786
ACPL_2803
Beta-lysine 5,6-aminomutase.
       0.785
ACPL_2801
Acyl-CoA hydrolase.
       0.784
ACPL_2797
ytzA-like uncharacterized protein; Protein affecting phage T7 exclusion by the F plasmid.
  
    0.670
dpm-2
Dolichol-phosphate mannosyltransferase; Glycosyltransferases involved in cell wall biogenesis.
  
    0.621
ACPL_2806
Lysine 2,3-aminomutase.
       0.565
ACPL_7286
Uncharacterized protein; Imidazolonepropionase and related amidohydrolases.
  
     0.475
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.