STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2812Hypothetical protein. (189 aa)    
Predicted Functional Partners:
ACPL_2813
Transcriptional regulators.
       0.639
ACPL_3517
Anti-sigma F factor; FOG: PAS/PAC domain.
  
     0.563
acd
Acyl-CoA dehydrogenases.
       0.551
ACPL_3895
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
     0.547
prsR-3
Anti-sigma F factor; Signal transduction histidine kinase.
  
     0.538
ACPL_2811
Predicted esterase.
       0.524
ACPL_2810
YD repeat-containing protein; Methyl-accepting chemotaxis protein.
 
     0.502
ACPL_8212
Hypothetical protein; Transposase and inactivated derivatives, IS30 family.
  
     0.467
ACPL_1601
Hypothetical protein.
  
     0.452
ACPL_349
Hypothetical protein.
 
     0.434
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.