STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2813Transcriptional regulators. (149 aa)    
Predicted Functional Partners:
nadR
Transcriptional regulator nadR; FAD synthase.
   
  
 0.768
acd
Acyl-CoA dehydrogenases.
       0.728
ACPL_1646
Transcriptional regulatory protein ompR; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
    0.672
ACPL_7632
Chromosome initiation inhibitor; Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
  
 0.658
ACPL_2812
Hypothetical protein.
       0.639
ACPL_5319
Membrane-bound protein lytR; Transcriptional regulator.
   
    0.635
ACPL_8294
Membrane-bound protein lytR; Transcriptional regulator.
   
    0.635
afsR-2
Regulatory protein afsR; Predicted ATPase.
   
    0.634
ACPL_2815
5'-3' exonuclease (including N-terminal domain of PolI).
       0.616
ACPL_4673
NAD-dependent protein deacetylases, SIR2 family.
  
    0.588
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.