STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2821Putative MFS-type transporter; Permeases of the major facilitator superfamily. (410 aa)    
Predicted Functional Partners:
ACPL_2820
Protein tolB.
     0.954
sapM
Acid phosphatase.
 
     0.832
ACPL_3127
Protein tolB; Periplasmic component of the Tol biopolymer transport system.
     0.797
ACPL_2819
Hypothetical protein.
       0.693
ACPL_2823
Signaling protein ykoW; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
       0.506
phoA
Alkaline phosphatase; Predicted phosphohydrolases.
 
     0.494
ACPL_3115
Uncharacterized protein contain chitin-binding domain type 3.
  
     0.447
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.