Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACPL_2829Abortive infection protein; Predicted metal-dependent membrane protease. (265 aa)    
Predicted Functional Partners:
ACPL_7023
Predicted membrane protein.
 
     0.744
ACPL_590
Predicted integral membrane protein.
  
     0.611
ACPL_4558
Predicted integral membrane protein.
  
     0.589
phoD
Phosphodiesterase/alkaline phosphatase D.
       0.490
ACPL_2831
Coagulation factor 5/8 type domain protein.
       0.490
ACPL_916
Endoglucanase H; Beta-mannanase; Belongs to the glycosyl hydrolase 26 family.
  
     0.464
ACPL_7433
Hypothetical protein.
  
     0.461
pepQ
Xaa-Pro aminopeptidase.
 
   
 0.452
ACPL_3190
ycaO-like uncharacterized protein.
  
  
 0.451
ACPL_3748
Uncharacterized protein.
  
  
 0.451
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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