STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2838Hypothetical protein. (222 aa)    
Predicted Functional Partners:
ACPL_4543
Hypothetical protein; ABC-type sugar transport systems, ATPase components.
  
 
 0.903
ACPL_7420
Laminin subunit alpha-3; AAA ATPase containing von Willebrand factor type A (vWA) domain.
  
     0.631
ogt-3
UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110 kDa subunit; FOG: TPR repeat.
 
 
 
 0.600
ACPL_2778
Hypothetical protein.
  
    0.554
ACPL_2839
yecE-like uncharacterized protein.
       0.540
ACPL_7107
Hypothetical protein.
  
     0.493
ACPL_7185
Predicted transcriptional regulators.
  
     0.456
ACPL_7776
yjcG-like uncharacterized protein; 2'-5' RNA ligase.
  
     0.450
ACPL_2553
Putative UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase SEC; FOG: TPR repeat.
  
 
 0.423
ACPL_1080
Macrolide export ATP-binding/permease protein macB; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.422
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.