STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
inv1Beta-fructofuranosidase, insoluble isoenzyme 1; Beta-fructosidases (levanase/invertase). (346 aa)    
Predicted Functional Partners:
ACPL_2842
Hypothetical protein.
       0.773
ACPL_2840
Hypothetical protein.
       0.551
malL
Oligo-1,6-glucosidase; Glycosidases.
 
  
 0.521
ACPL_2843
Hypothetical protein.
       0.488
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
      
 0.450
groS
10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
      
 0.426
ACPL_1069
Hypothetical protein; Predicted amidophosphoribosyltransferases.
   
    0.420
ACPL_2839
yecE-like uncharacterized protein.
       0.403
ACPL_2547
Alpha amylase catalytic region; Glycosidases.
 
  
 0.402
aglC
Alpha amylase catalytic region; Glycosidases.
 
  
 0.401
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.