Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
inv1Beta-fructofuranosidase, insoluble isoenzyme 1; Beta-fructosidases (levanase/invertase). (346 aa)    
Predicted Functional Partners:
ACPL_2842
Hypothetical protein.
       0.773
ACPL_7459
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
 
 0.590
ACPL_2840
Hypothetical protein.
       0.551
ACPL_4273
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.520
arsC
Protein-tyrosine phosphatase, low molecular weight; Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.520
ACPL_2843
Hypothetical protein.
       0.488
malL
Oligo-1,6-glucosidase; Glycosidases.
 
  
 0.438
gltB
Glutamate synthase domain 2.
  
   
 0.405
ACPL_2839
yecE-like uncharacterized protein.
       0.403
ACPL_1069
Hypothetical protein; Predicted amidophosphoribosyltransferases.
   
    0.401
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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