Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
argB | gltB | ACPL_6414 | ACPL_1813 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Glutamate synthase domain 2. | 0.902 |
argB | vbsC | ACPL_6414 | ACPL_2844 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Histone acetyltransferase HPA2 and related acetyltransferases. | 0.626 |
glgX | vbsC | ACPL_2845 | ACPL_2844 | Glycogen operon protein GlgX; Type II secretory pathway, pullulanase PulA and related glycosidases; Belongs to the glycosyl hydrolase 13 family. | Histone acetyltransferase HPA2 and related acetyltransferases. | 0.494 |
gltB | argB | ACPL_1813 | ACPL_6414 | Glutamate synthase domain 2. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.902 |
gltB | vbsC | ACPL_1813 | ACPL_2844 | Glutamate synthase domain 2. | Histone acetyltransferase HPA2 and related acetyltransferases. | 0.435 |
vbsC | argB | ACPL_2844 | ACPL_6414 | Histone acetyltransferase HPA2 and related acetyltransferases. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.626 |
vbsC | glgX | ACPL_2844 | ACPL_2845 | Histone acetyltransferase HPA2 and related acetyltransferases. | Glycogen operon protein GlgX; Type II secretory pathway, pullulanase PulA and related glycosidases; Belongs to the glycosyl hydrolase 13 family. | 0.494 |
vbsC | gltB | ACPL_2844 | ACPL_1813 | Histone acetyltransferase HPA2 and related acetyltransferases. | Glutamate synthase domain 2. | 0.435 |