STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2858Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components. (310 aa)    
Predicted Functional Partners:
pdr1-2
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
 
  
 0.961
ACPL_4557
ABC-type multidrug transport system, permease component.
 
  
 0.837
drrB
Daunorubicin resistance transmembrane protein; ABC-type multidrug transport system, permease component.
 
  
 0.833
pdr1
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
 
    0.823
pdr1-4
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
   
 0.784
ACPL_2853
Putative AAA domain-containing protein; ATPases of the AAA+ class.
  
   0.669
ACPL_2854
Hypothetical protein.
       0.651
ACPL_2855
Hypothetical protein.
       0.651
ACPL_2856
Endonuclease/exonuclease/phosphatase family domain-containing protein 1; Transcriptional accessory protein.
       0.651
ACPL_2857
Anaerobic ribonucleoside-triphosphate reductase activating protein; Pyruvate-formate lyase-activating enzyme.
       0.651
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.