STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2860Putative disease resistance protein; Predicted ATPase. (1067 aa)    
Predicted Functional Partners:
nadR
Transcriptional regulator nadR; FAD synthase.
   
    0.820
ACPL_2529
yqjI-like uncharacterized protein; Predicted transcriptional regulators.
  
    0.589
ACPL_1235
Transcriptional regulator, PadR-like family.
  
    0.583
ACPL_2347
Transcriptional regulator, PadR-like family; Predicted transcriptional regulators.
  
    0.488
ACPL_1006
Asparagine synthase (glutamine-hydrolyzing).
 
     0.476
ACPL_4536
yhcZ-like uncharacterized transcriptional regulatory protein; ATP-dependent transcriptional regulator.
 
  
 0.476
ACPL_2847
Transcriptional regulators.
  
    0.471
ACPL_3915
Carbohydrate diacid regulator; Regulator of polyketide synthase expression.
  
    0.459
ACPL_7377
Putative regulatory protein embR; Response regulator containing CheY-like receiver and SARP domains.
 
    0.455
ACPL_3356
Putative hydrolase; Ketosteroid isomerase homolog.
  
     0.449
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.