Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACPL_2866Hypothetical protein. (416 aa)    
Predicted Functional Partners:
ACPL_2867
Membrane-bound lytic murein transglycosylase F; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
  
 0.969
ACPL_5208
Serine/threonine protein kinase.
 
  
 0.916
ACPL_5206
Membrane-bound lytic murein transglycosylase F; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.842
ACPL_5210
Collagen alpha-1(VII) chain; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
     0.677
ACPL_6769
Uncharacterized protein; Predicted esterase.
 
  
 0.602
adhC
Zn-dependent alcohol dehydrogenases, class III.
  
  
 0.577
ACPL_7670
Zn-dependent alcohol dehydrogenases, class III.
  
  
 0.577
prpF-2
Phosphoserine phosphatase rsbP; Serine phosphatase RsbU, regulator of sigma subunit.
       0.576
ACPL_3309
Endo-1,4-beta-xylanase Z; Predicted esterase.
 
  
 0.576
ACPL_5211
Oxoglutarate dehydrogenase inhibitor; FOG: FHA domain.
 
     0.564
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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