STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2881Collagen alpha-5(VI) chain; Translation initiation factor 2 (IF-2; GTPase). (248 aa)    
Predicted Functional Partners:
gpsI
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.907
ACPL_1851
Hypothetical protein; Displays ATPase and GTPase activities.
   
 
 0.758
ACPL_2060
Calcineurin-binding protein cabin-1; Serine/threonine protein kinase.
 
  
 0.750
ACPL_5296
Obscurin; Spore coat assembly protein.
 
     0.717
metH
5-methyltetrahydrofolate-homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.665
ACPL_1560
Mucin-19; Predicted membrane protein.
  
     0.657
ACPL_7717
Halomucin; Type V secretory pathway, adhesin AidA.
  
     0.648
ACPL_419
Polycystic kidney disease protein 1-like 3; Type V secretory pathway, adhesin AidA.
 
     0.643
ACPL_4905
Polycystic kidney disease protein 1-like 3; Serine/threonine protein kinase.
  
     0.637
ACPL_2333
Cell surface glycoprotein 1; FOG: Glucan-binding domain (YG repeat).
  
     0.631
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.