STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pknASerine/threonine protein kinase. (332 aa)    
Predicted Functional Partners:
prpH
Serine/threonine protein phosphatase.
 
 
 0.839
ACPL_5335
Serine/threonine protein phosphatase.
 
 
 0.833
ACPL_6617
Serine/threonine protein phosphatase.
 
 
 0.833
ACPL_162
Serine/threonine protein phosphatase.
 
 0.832
ACPL_5073
Oxoglutarate dehydrogenase inhibitor; FOG: FHA domain.
 
 
 
 0.660
amfT
Serine/threonine protein kinase.
  
     0.589
ACPL_2896
Hypothetical protein.
       0.581
ACPL_160
Oxoglutarate dehydrogenase inhibitor; FOG: FHA domain.
 
 
 
 0.573
ACPL_5209
Protein kinase and PP2C-like domain-containing protein; Serine/threonine protein phosphatase.
 
 
 0.571
ACPL_2897
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3; FOG: TPR repeat.
  
    0.478
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.