Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2896Hypothetical protein. (303 aa)    
Predicted Functional Partners:
ACPL_2897
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3; FOG: TPR repeat.
 
   
 0.928
pknA
Serine/threonine protein kinase.
       0.581
ACPL_7621
Hypothetical protein.
  
     0.575
muc4
Mucin-4; PPE-repeat proteins.
  
 
   0.537
ACPL_2358
Radical SAM domain protein; Fe-S oxidoreductase.
  
     0.522
ACPL_4273
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.520
arsC
Protein-tyrosine phosphatase, low molecular weight; Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.520
ACPL_7459
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.520
ACPL_6851
Hypothetical protein.
  
     0.500
ACPL_6585
Hypothetical protein.
  
     0.481
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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