Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
paaKPhenylacetic acid degradation NADH oxidoreductase; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. (348 aa)    
Predicted Functional Partners:
paaD
Phenylacetic acid degradation protein paaD; Predicted metal-sulfur cluster biosynthetic enzyme.
 
 
 0.998
paaI
Phenylacetic acid degradation protein paaC.
 
 0.998
paaB
Phenylacetic acid degradation protein paaB; Uncharacterized enzyme of phenylacetate metabolism.
 
 
 0.998
paaA
phenylacetate-CoA oxygenase subunit PaaA.
 
 0.998
iscU
Similar to mitochondrial Iron sulfur cluster assembly protein 1; NifU homolog involved in Fe-S cluster formation.
  
 0.941
chcB
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.936
pks2A
Polyketide synthase modules and related proteins.
  
 0.924
ACPL_5517
Enoyl-CoA hydratase/carnithine racemase.
  
 
 0.922
pks1B
Polyketide synthase modules and related proteins.
   
 0.907
pks3B
Polyketide synthase modules and related proteins.
   
 0.907
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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