STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2947Hypothetical protein. (212 aa)    
Predicted Functional Partners:
ACPL_1400
Diguanylate cyclase; FOG: PAS/PAC domain.
  
     0.639
ACPL_1464
Hypothetical protein.
  
     0.598
ACPL_2946
Transcriptional regulator/sugar kinase.
       0.598
ACPL_6919
Glutamine amidotransferase subunit pdxT.
  
   0.584
ACPL_2080
Hypothetical protein.
  
     0.555
ACPL_1144
Hypothetical protein.
  
     0.542
ACPL_5641
Putative lipopolysaccharide biosynthesis protein; Lipid A core - O-antigen ligase and related enzymes.
  
     0.497
ACPL_6918
Phosphoglycolate phosphatase 1; Predicted phosphatases.
  
     0.494
hstK
Serine/threonine protein kinase; Predicted ATPase.
 
  
 0.485
ACPL_598
Transmembrane and TPR repeat-containing protein 4; FOG: TPR repeat.
  
 
   0.459
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.