Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
chiA-2Chitinase; Belongs to the glycosyl hydrolase 18 family. (436 aa)    
Predicted Functional Partners:
nedA
Sialidase; FOG: PKD repeat.
 
  
 0.719
chiA-3
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.717
ACPL_5152
Uncharacterized protein conserved in bacteria.
 
  
 0.693
chiA
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.689
ACPL_8177
Uncharacterized protein conserved in bacteria.
 
  
 0.681
ACPL_4964
Coagulation factor 5/8 type domain protein; Beta-glucanase/Beta-glucan synthetase.
  
     0.678
ACPL_3177
Ricin; Endoglucanase.
 
  
 0.676
ACPL_4647
Abrin-c.
 
  
 0.671
ACPL_4966
Hypothetical protein; FOG: PKD repeat.
  
   
 0.658
ACPL_5105
Uncharacterized protein conserved in bacteria.
 
  
 0.658
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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