STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2989Putative transcriptional regulator, MerR family. (219 aa)    
Predicted Functional Partners:
ACPL_2990
Inter-alpha-trypsin inhibitor heavy chain H3; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
     0.964
ACPL_1476
Hypothetical protein.
  
     0.657
ACPL_4241
Hypothetical protein.
  
     0.609
ACPL_6958
Hypothetical protein.
 
   
 0.604
ACPL_1135
Hypothetical protein.
  
     0.577
ACPL_2988
Kynurenine formamidase; Predicted metal-dependent hydrolase.
       0.566
ACPL_2119
Hypothetical protein.
  
   
 0.561
ACPL_4387
Hypothetical protein.
  
     0.552
ACPL_4205
Beta-galactoside-specific lectin 3.
  
     0.542
ACPL_7144
Hypothetical protein.
  
     0.502
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.