STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2997Otogelin; Type V secretory pathway, adhesin AidA. (510 aa)    
Predicted Functional Partners:
ACPL_2996
Putative cholesterol esterase.
 
     0.905
ACPL_5722
Cholesterol esterase.
 
     0.796
ACPL_2692
Hypothetical protein.
 
     0.555
ACPL_7045
Hypothetical protein; Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.553
ACPL_8314
Hypothetical protein.
  
     0.540
ACPL_2998
Hypothetical protein.
       0.494
ACPL_1565
Putative transmembrane protein.
 
     0.486
ACPL_5133
Uncharacterized protein conserved in bacteria.
  
     0.430
ACPL_2926
HTH-type transcriptional regulator malT; DNA-binding HTH domain-containing proteins.
  
  
 0.421
ACPL_1042
Hypothetical protein; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
     0.419
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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