STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3001Antigen 84; DNA segregation ATPase FtsK/SpoIIIE and related proteins. (299 aa)    
Predicted Functional Partners:
ACPL_3002
Hypothetical protein.
       0.773
ACPL_1769
Hypothetical protein.
 
    0.679
ACPL_474
Hypothetical protein.
  
     0.641
mvp
Major vault protein; Myosin heavy chain.
  
     0.616
ACPL_1683
Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.603
ACPL_7977
Hypothetical protein.
  
     0.571
ACPL_1362
Hypothetical protein.
  
     0.564
ACPL_7184
Laminin subunit beta-1; Phage shock protein A (IM30), suppresses sigma54-dependent transcription.
  
   
 0.560
sepF
Cell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
  
 0.542
ACPL_868
Uncharacterized protein; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
     0.528
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.