STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcIGlucan endo-1,3-beta-glucosidase; Uncharacterized protein conserved in bacteria. (765 aa)    
Predicted Functional Partners:
ACPL_3008
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.922
ACPL_3007
Hypothetical protein.
 
   
 0.919
ACPL_3005
Endoglucanase.
 
     0.895
ACPL_3009
Ricin B lectin; Alpha-galactosidase.
 
     0.875
ACPL_4519
Cellulose-binding family II; Alpha-L-arabinofuranosidase.
 
   
 0.756
ACPL_3011
Hypothetical protein; Poly(3-hydroxybutyrate) depolymerase.
  
     0.729
ACPL_5019
Pectinesterase; Pectin methylesterase.
  
     0.729
ACPL_5719
Pectinesterase; Pectin methylesterase.
  
     0.721
ACPL_4741
Hypothetical protein.
 
     0.694
abnA
Arabinan endo-1,5-alpha-L-arabinosidase; Beta-xylosidase.
 
   
 0.666
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.