Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3027Hypothetical protein. (263 aa)    
Predicted Functional Partners:
ACPL_6091
Integral membrane protein.
 
     0.726
fdxG
Ferredoxin.
  
     0.494
ACPL_8274
Hypothetical protein.
 
     0.489
ACPL_6032
Putative nucleotidase.
  
     0.465
ACPL_5563
Sphingomyelin phosphodiesterase 2.
 
  
 0.451
ACPL_8175
Uncharacterized protein; FOG: WD40-like repeat.
  
     0.449
ACPL_584
Membrane protein ydfJ; Predicted drug exporters of the RND superfamily.
 
     0.435
ACPL_3028
ATPases of the AAA+ class.
       0.430
ACPL_5471
Sphingomyelin phosphodiesterase 2.
 
  
 0.411
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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