STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_305Midasin; AAA ATPase containing von Willebrand factor type A (vWA) domain. (352 aa)    
Predicted Functional Partners:
ACPL_304
Hypothetical protein.
       0.541
ACPL_303
Hypothetical protein.
       0.530
aprA-2
Peptidase S8/S53 subtilisin kexin sedolisin; Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
 
 0.506
ACPL_6719
Proprotein convertase subtilisin/kexin type 6; Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
 
   0.449
rpgR
X-linked retinitis pigmentosa GTPase regulator; Alpha-tubulin suppressor and related RCC1 domain-containing proteins.
  
     0.448
ACPL_6704
Protease; Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
  
   0.420
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.