Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glcDGlycolate oxidase; FAD/FMN-containing dehydrogenases. (486 aa)    
Predicted Functional Partners:
glcF
Putative glycolate oxidase iron-sulfur subunit; Fe-S oxidoreductase.
 
 0.988
ACPL_3078
Glycolate oxidase FAD binding subunit; FAD/FMN-containing dehydrogenases.
  
 
0.979
glcE
Glycolate oxidase FAD binding subunit; FAD/FMN-containing dehydrogenases.
 
  
  0.976
sucA
2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
  
 
 0.923
ACPL_5158
Malate synthase; Belongs to the malate synthase family.
  
 
 0.917
ACPL_6612
Malate synthase.
  
 
 0.917
kdgA
2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase.
   
 
 0.907
ACPL_6918
Phosphoglycolate phosphatase 1; Predicted phosphatases.
    
 0.905
ACPL_4302
Putative transcriptional regulator, GntR family; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.
    
  0.904
ACPL_8270
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.
    
  0.904
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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