STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcFPutative glycolate oxidase iron-sulfur subunit; Fe-S oxidoreductase. (458 aa)    
Predicted Functional Partners:
glcD
Glycolate oxidase; FAD/FMN-containing dehydrogenases.
 
 0.988
ACPL_3078
Glycolate oxidase FAD binding subunit; FAD/FMN-containing dehydrogenases.
 
 
 0.988
glcE
Glycolate oxidase FAD binding subunit; FAD/FMN-containing dehydrogenases.
 
 
 0.979
ACPL_5158
Malate synthase; Belongs to the malate synthase family.
  
 
 0.915
ACPL_6612
Malate synthase.
  
 
 0.915
aceA
Isocitrate lyase.
     
 0.907
kdgA
2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase.
     
 0.904
ACPL_6918
Phosphoglycolate phosphatase 1; Predicted phosphatases.
    
 0.902
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
     
  0.900
aao
Glycine/D-amino acid oxidases (deaminating).
     
 0.802
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.