STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3083HTH-type transcriptional repressor purR; ABC-type xylose transport system, periplasmic component. (387 aa)    
Predicted Functional Partners:
lsrC-3
ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.958
ACPL_859
Phosphate import ATP-binding protein pstB; ABC-type sugar transport systems, ATPase components.
 
 
 0.944
chvE-2
Putative multiple sugar transport system substrate-binding protein; ABC-type xylose transport system, periplasmic component.
  
  
 
0.924
ACPL_858
D-xylose transport system substrate-binding protein; ABC-type xylose transport system, periplasmic component.
  
  
 
0.903
araH-2
Putative multiple sugar transport system permease protein; ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.776
araH
Putative multiple sugar transport system permease protein; ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.736
araG
L-arabinose transport ATP-binding protein araG; ABC-type sugar transport system, ATPase component.
  
 0.539
araG-2
L-arabinose transport ATP-binding protein araG; ABC-type sugar transport system, ATPase component.
  
 0.532
gabD
Succinate-semialdehyde dehydrogenase (NADP+); NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
       0.416
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.410
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.