Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACPL_3083HTH-type transcriptional repressor purR; ABC-type xylose transport system, periplasmic component. (387 aa)    
Predicted Functional Partners:
lsrC-3
ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.960
ACPL_859
Phosphate import ATP-binding protein pstB; ABC-type sugar transport systems, ATPase components.
 
 
 0.947
chvE-2
Putative multiple sugar transport system substrate-binding protein; ABC-type xylose transport system, periplasmic component.
  
  
 
0.924
ACPL_858
D-xylose transport system substrate-binding protein; ABC-type xylose transport system, periplasmic component.
  
  
 
0.903
araH-2
Putative multiple sugar transport system permease protein; ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.788
araH
Putative multiple sugar transport system permease protein; ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.750
araG
L-arabinose transport ATP-binding protein araG; ABC-type sugar transport system, ATPase component.
 
 
 0.555
araG-2
L-arabinose transport ATP-binding protein araG; ABC-type sugar transport system, ATPase component.
 
 
 0.548
cydCD
Multidrug resistance protein 2; ABC-type multidrug transport system, ATPase and permease components.
     
  0.428
gabD
Succinate-semialdehyde dehydrogenase (NADP+); NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
       0.416
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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