STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3086Hypothetical protein. (158 aa)    
Predicted Functional Partners:
ACPL_2024
SAM-dependent methyltransferases.
 
    0.668
ACPL_2023
Camphene synthase; Similar to chloroplast protein.
 
     0.627
ACPL_3085
Chaperone protein dnaK; Molecular chaperone.
  
 0.608
ACPL_1153
ygjK-like uncharacterized protein; Neutral trehalase.
  
 
 0.579
otsA
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Trehalose-6-phosphate synthase.
  
  
 0.578
otsA-2
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Trehalose-6-phosphate synthase.
  
  
 0.578
otsA-3
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Trehalose-6-phosphate synthase.
  
  
 0.578
ACPL_3344
Hypothetical protein.
  
    0.578
otsA-4
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Trehalose-6-phosphate synthase.
  
  
 0.578
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.562
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.