Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACPL_3101Protein involved in cellulose biosynthesis (CelD). (355 aa)    
Predicted Functional Partners:
ACPL_3099
Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.
       0.812
udgA
Predicted UDP-glucose 6-dehydrogenase.
       0.790
ACPL_3102
Polypeptide N-acetylgalactosaminyltransferase 5; Predicted glycosyltransferases.
       0.782
rfbX
Oligosaccharide repeat-containing transporter; Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.616
ACPL_3103
Hypothetical protein.
       0.603
ACPL_5923
Hypothetical protein.
  
     0.601
ACPL_6717
Cell division control-like protein; ATPases of the AAA+ class.
  
     0.559
dpm1-2
Glycosyltransferases involved in cell wall biogenesis.
 
   
 0.537
ACPL_3800
Hypothetical protein.
  
     0.469
ACPL_5663
Abortive infection protein; Predicted metal-dependent membrane protease.
  
     0.465
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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