STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3102Polypeptide N-acetylgalactosaminyltransferase 5; Predicted glycosyltransferases. (307 aa)    
Predicted Functional Partners:
ACPL_3107
Glycosyltransferases involved in cell wall biogenesis.
   
 0.974
ACPL_3099
Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.919
rmlC
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes.
 
  
 0.865
rmlD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.819
ACPL_3111
O-antigen polymerase.
 
  
 0.807
udgA
Predicted UDP-glucose 6-dehydrogenase.
  
  
 0.793
ACPL_3101
Protein involved in cellulose biosynthesis (CelD).
       0.782
ACPL_3112
Lipopolysaccharide biosynthesis protein wzxC; Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.746
ACPL_3097
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.693
ACPL_3115
Uncharacterized protein contain chitin-binding domain type 3.
  
     0.658
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.