STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nemANADH:flavin oxidoreductases, Old Yellow Enzyme family. (357 aa)    
Predicted Functional Partners:
opr1
NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
  
 
0.906
ACPL_5644
Kynurenine 3-monooxygenase; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
    
 0.900
nemA-2
NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
  
 
0.900
ACPL_8038
Transcriptional regulators, similar to M. xanthus CarD.
   
    0.620
ACPL_311
yxaF-like uncharacterized HTH-type transcriptional regulator; Transcriptional regulator.
  
    0.519
rpsA
Ribosomal protein S1.
   
    0.483
fixA
Protein fixA; Electron transfer flavoprotein, beta subunit.
  
 
 0.483
tuf
Elongation factor EF-Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.435
tuf-2
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.435
ACPL_313
Uncharacterized protein conserved in bacteria.
       0.432
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.