STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3122Bifunctional protein glmU; Acetyltransferase (isoleucine patch superfamily). (368 aa)    
Predicted Functional Partners:
ACPL_3124
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
 
 0.999
ACPL_1533
2-oxoisovalerate dehydrogenase E1 component; Transketolase.
  
 0.998
ACPL_914
Lipopolysaccharide biosynthesis protein; ATPases involved in chromosome partitioning.
 
 
 0.986
wzc
Non-specific protein-tyrosine kinase; ATPases involved in chromosome partitioning.
 
 
 0.972
wzc-2
Receptor protein-tyrosine kinase; ATPases involved in chromosome partitioning.
  
 
 0.968
sucA
2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
  
 0.964
ACPL_3123
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
 
 0.957
ACPL_3099
Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.930
ACPL_7785
Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.930
rfbP
Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.930
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.